Metadata-Version: 2.1
Name: deepcon
Version: 0.3.6
Summary: Protein Contact Prediction using Dilated Convolutional Neural Networks with Dropout
Home-page: https://github.com/ba-lab/deepcon-package
Author: Badri Adhikari
Author-email: adhikarib@umsl.edu
License: UNKNOWN
Platform: UNKNOWN
Classifier: Programming Language :: Python
Classifier: License :: OSI Approved :: MIT License
Classifier: Intended Audience :: Science/Research
Classifier: Operating System :: OS Independent
Description-Content-Type: text/markdown
Requires-Dist: numpy
Requires-Dist: pyYAML
Requires-Dist: tensorflow
Requires-Dist: keras

# Deepcon-package
Python package for the DEEPCON contact prediction tool at https://github.com/ba-lab/DEEPCON

## How to install DEEPCON package?
```bash
pip3 install deepcon
```
## How to test DEEPCON package?
```bash
wget https://raw.githubusercontent.com/ba-lab/deepcon-package/master/deepcon/test/1a0tP0.aln
```
```bash
python3
```
```python
import deepcon
from deepcon import deepconcovariance
deepconcovariance.main("1a0tP0.aln","1a0tP0.rr")
```
To print the contact map as image, add the image name as the last parameter (optional)
```
deepconcovariance.main("1a0tP0.aln","1a0tP0.rr", "1a0tP0.png")
```
Example contact map as an image:
![](1a0tP0.png)

### Python package developed by:
Chase Richards<br/>
Email: CNRichards@gmail.com


