click
more_itertools
wandb
numpy
torch
pyfaidx
genomepy
grelu<=1.0.11,>=1.0.10
lightning
torchmetrics
bioframe
scipy
scikit-learn
pandas
tqdm
captum
anndata
h5py
pyBigWig
pyarrow
safetensors
tangermeme>=1.0.0
faster-modisco-lite>=3.0.0

[:python_version < "3.8"]
importlib-metadata

[all]
cyvcf2
matplotlib
seaborn
plotnine

[plot]
matplotlib
seaborn
plotnine

[testing]
setuptools
pytest
pytest-cov

[vep]
cyvcf2
